Diagnostic inference by use of assays such as ELISA is usually done by dichotomizing the optical density (OD)-values based on a predetermined cut-off. For paratuberculosis, a slowly developing infection in cattle and other ruminants, it is known that laboratory factors as well as animal specific covariates influence the OD-value, but while laboratory factors are adjusted for, the animal specific covariates are seldom utilized when establishing cut-offs. Furthermore, when dichotomizing an OD-value, information is lost. Considering the poor diagnostic performance of ELISAs for diagnosis of paratuberculosis, a framework for utilizing the continuous OD-values as well as known coavariates could be useful in addition to the traditional approaches, e.g. for estimating within-herd prevalences.
The objective of this study was to develop a Bayesian mixture model with two components describing the continuous OD response of infected and non-infected cows, while adjusting for known covariates. Based on this model, four different within-herd prevalence indicators were considered: the mean prevalence in the herd; the age adjusted prevalence of the herd for better between-herd comparisons; the rank of the age adjusted prevalence to better compare across time; and a threshold-based prevalence to describe differences between herds. For comparison, the within-herd prevalence and associated rank using a traditional dichotomization approach based on a single cut-off for an OD corrected for laboratory variation was estimated in a Bayesian model with priors for sensitivity and specificity.
The models were applied to the OD-values of a milk ELISA using samples from all lactating cows in 100 Danish dairy herds in three sampling rounds 13 months apart. The results of the comparison showed that including covariates in the mixture model reduced the uncertainty of the prevalence estimates compared to the cut-off based estimates. This allowed a more informative ranking of the herds where low ranking and high ranking herds were easier to identify. 相似文献
Between holding contacts are more common over short distances and this may have implications for the dynamics of disease spread through these contacts. A reliable estimation of how contacts depend on distance is therefore important when modeling livestock diseases. In this study, we have developed a method for analyzing distant dependent contacts and applied it to animal movement data from Sweden. The data were analyzed with two competing models. The first model assumes that contacts arise from a purely distance dependent process. The second is a mixture model and assumes that, in addition, some contacts arise independent of distance. Parameters were estimated with a Bayesian Markov Chain Monte Carlo (MCMC) approach and the model probabilities were compared. We also investigated possible between model differences in predicted contact structures, using a collection of network measures.We found that the mixture model was a much better model for the data analyzed. Also, the network measures showed that the models differed considerably in predictions of contact structures, which is expected to be important for disease spread dynamics. We conclude that a model with contacts being both dependent on, and independent of, distance was preferred for modeling the example animal movement contact data. 相似文献
For the implementation of site-specific fungicide applications, the spatio-temporal dynamics of crop diseases must be well
known. Remote sensing can be a useful tool to monitor the heterogeneity of crop vitality within agricultural sites. However,
the identification of fungal infections at an early growth stage is essential. This study examines the potential of multi-spectral
remote sensing for a multi-temporal analysis of crop diseases. Within an experimental field, a 6 ha plot of winter wheat was
grown, containing all possible infective stages of the powdery mildew (Blumeria graminis) and leaf rust (Puccinia recondita) pathogens. Three high-resolution remote sensing images were used to execute a spatio-temporal analysis of the infection
dynamics. A decision tree, using mixture tuned matched filtering (MTMF) results and the Normalized Difference Vegetation Index
(NDVI), was applied to classify the data into areas showing different levels of disease severity. Classification results were
compared to ground truth data. The classification accuracy of the first scene was only 56.8%, whereas the scenes from May
28th and June 20th achieved considerably higher accuracies of 65.9% and 88.6% respectively. The results showed that high-resolution multi-spectral
data are generally suitable to detect in-field heterogeneities of crop vigour but are only moderately suitable for early detection
of crop infections.
采用菌丝生长速率法测定了氯啶菌酯、苯醚甲环唑及其混配制剂对葡萄炭疽病菌和穗轴褐枯病菌菌丝生长的抑制活性,并用孙云沛法测定了混配制剂的共毒系数(CTC)。结果表明:氯啶菌酯抑制葡萄炭疽病菌和穗轴褐枯病菌菌丝生长的抑制中浓度(EC50值)分别为2.1793和1.1274μg/mL,而苯醚甲环唑的EC50值分别为0.6667和0.1041μg/mL。当氯啶菌酯与苯醚甲环唑按10∶1混配时复配制剂抑制这2种病原菌菌丝生长的CTC最高,增效作用最大。田间试验结果显示:试制样品22%氯啶菌酯.苯醚甲环唑EC(20%氯啶菌酯+2%苯醚甲环唑)以90~120 g a.i./hm2喷药2~3次对葡萄黑痘病、霜霉病、炭疽病均有较高的防治效果。 相似文献